Virus Details


VHFID10081

Host Factor Information

Gene Name CGAS
HF Protein Name CYCLIC GMP-AMP SYNTHASE
HF Function
Uniprot ID Q8N884
Protein Sequence View Fasta Sequence
NCBI Gene ID 115004
Host Factor (HF) Name in Paper CGAS
Gene synonyms C6orf150 MB21D1
Ensemble Gene ID ENSG00000164430
Ensemble Transcript ENST00000370315.4 [Q8N884-1];ENST00000370318.5 [Q8N884-2]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0002218, GO:0002221, GO:0002230, GO:0002637, GO:0002753, GO:0003677, GO:0003682, GO:0003690, GO:0005524, GO:0005525, GO:0005546, GO:0005634, GO:0005654, GO:0005737, GO:0005829, GO:0005886, GO:0006281, GO:0006974, GO:0008340, GO:0016604, GO:0019933, GO:0019934, GO:0031491, GO:0032481, GO:0035861, GO:0038001, GO:0042803, GO:0045087, GO:0046872, GO:0050863, GO:0051607, GO:0061501, GO:0071360, GO:0140693, GO:0140896, GO:0160004, GO:0160049, GO:2000042, GO:2000774,
MINT ID Q8N884
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 613973
PANTHER ID PTHR10656;PTHR10656:SF35
PDB ID(s) 4KM5, 4LEV, 4LEW, 4MKP, 4O67, 4O68, 4O69, 5V8O, 5VDO, 5VDP, 5VDQ, 5VDR, 5VDS, 5VDT, 5VDU, 5VDV, 5VDW, 6CT9, 6CTA, 6EDB, 6EDC, 6LRC, 6LRE, 6LRI, 6LRJ, 6LRK, 6LRL, 6MJU, 6MJW, 6MJX, 6NAO, 6NFG, 6NFO, 6O47, 6Y5D, 6Y5E, 7C0M, 7CCQ, 7CCR, 7FTF, 7FTG, 7FTH, 7FTI, 7FTJ, 7FTK, 7FTL, 7FTM, 7FTN, 7FTO, 7FTP, 7FTQ, 7FTR, 7FTS, 7FTT, 7FTU, 7FTV, 7FTW, 7FTX, 7FTY, 7FTZ, 7FU0, 7FU1, 7FU2, 7FU3, 7FU4, 7FU5, 7FU6, 7FU7, 7FU8, 7FU9, 7FUA, 7FUB, 7FUC, 7FUD, 7FUE, 7FUF, 7FUG, 7FUH, 7FUI, 7FUJ, 7FUK, 7FUL, 7FUM, 7FUN, 7FUO, 7FUP, 7FUQ, 7FUR, 8IME, 8IMF, 8IMG, 8OKX, 8OL1, 8SHZ, 8SI0, 8SJ8, 8WR8,
pfam ID PF03281, PF20266,
Drug Bank ID N.A.,
ChEMBL ID CHEMBL4105728
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Japanese encephalitis virus
Virus Short Name JEV
Order Amarillovirales
Virus Family Flaviviridae
Virus Subfamily N.A.
Genus Flavivirus
Species Japanese encephalitis virus
Host Vertebrates
Cell Tropism
Associated Disease Encephalitis
Mode of Transmission Sexual contact, blood, breast feeding
VIPR DB link https://www.viprbrc.org/brc/vipr_search.do?species=Japanese_encephalitis_virus
ICTV DB link https://ictv.global/report/183/flaviviridae
Virus Host DB link

Publication Information

Paper Title Proteomic landscape of Japanese encephalitis virus-infected fibroblasts
Author's Name Kiran Bala Sharma 1 2, Simran Chhabra 1, Suruchi Aggarwal 2, Aarti Tripathi 2, Arup Banerjee 1 2, Amit Kumar Yadav 2, Sudhanshu Vrati 1 2, Manjula Kalia 1 2
Journal Name MICROBIOLOGY SOCIETY
Pubmed ID 34546869
Abstract Advances in proteomics have enabled a comprehensive understanding of host-pathogen interactions. Here we have characterized Japanese encephalitis virus (JEV) infection-driven changes in the mouse embryonic fibroblast (MEF) proteome. Through tandem mass tagging (TMT)-based mass spectrometry, we describe changes in 7.85 % of the identified proteome due to JEV infection. Pathway enrichment analysis showed that proteins involved in innate immune sensing, interferon responses and inflammation were the major upregulated group, along with the immunoproteasome and poly ADP-ribosylation proteins. Functional validation of several upregulated anti-viral innate immune proteins, including an active cGAS-STING axis, was performed. Through siRNA depletion, we describe a crucial role of the DNA sensor cGAS in restricting JEV replication. Further, many interferon-stimulated genes (ISGs) were observed to be induced in infected cells. We also observed activation of TLR2 and inhibition of TLR2 signalling using TLR1/2 inhibitor CU-CPT22-blocked production of inflammatory cytokines IL6 and TNF-α from virus-infected N9 microglial cells. The major proteins that were downregulated by infection were involved in cell adhesion (collagens), transport (solute carrier and ATP-binding cassette transporters), sterol and lipid biosynthesis. Several collagens were found to be transcriptionally downregulated in infected MEFs and mouse brain. Collectively, our data provide a bird's-eye view into how fibroblast protein composition is rewired following JEV infection.
Used Model MEF,VERO,C6/36,N9
DOI 10.1099/jgv.0.001657