Virus Details


VHFID4995

Host Factor Information

Gene Name TBP
HF Protein Name TATA-box-binding protein
HF Function Inhibits viral replication by antagonizing E1-E2 protein complex formation on the viral origin of replication
Uniprot ID P20226
Protein Sequence View Fasta Sequence
NCBI Gene ID 6908
Host Factor (HF) Name in Paper TBP
Gene synonyms GTF2D1 TF2D TFIID
Ensemble Gene ID ENSG00000112592
Ensemble Transcript ENST00000230354 [P20226-1];ENST00000392092 [P20226-1];ENST00000540980 [P20226-2]
KEGG ID Go to KEGG Database
Gene Ontology ID(s) GO:0000790, GO:0000978, GO:0000987, GO:0001034, GO:0001047, GO:0001093, GO:0001103, GO:0001129, GO:0001939, GO:0001940, GO:0005634, GO:0005654, GO:0005669, GO:0005672, GO:0005719, GO:0005737, GO:0006361, GO:0006362, GO:0006363, GO:0006366, GO:0006367, GO:0006368, GO:0006383, GO:0007283, GO:0008134, GO:0016032, GO:0017162, GO:0019899, GO:0032991, GO:0042795, GO:0044212, GO:0045815, GO:0045893, GO:0051123, GO:0070491, GO:0097550, GO:1901796,
MINT ID P20226
STRING Click to see interaction map
GWAS Analysis Click to see gwas analysis
OMIM ID 600075
PANTHER ID PTHR10126
PDB ID(s) 1C9B, 1CDW, 1JFI, 1NVP, 1TGH, 4ROC, 4ROD, 4ROE, 5FUR, 5IY6, 5IY7, 5IY8, 5IY9, 5IYA, 5IYB, 5IYC, 5IYD, 5N9G,
pfam ID PF00352,
Drug Bank ID N.A.,
ChEMBL ID N.A.
Organism Homo sapiens (Human)

Pathogen Information

Virus Name Human Papillomavirus 11
Virus Short Name HPV11
Order Unassigned
Virus Family Papillomaviridae
Virus Subfamily N.A.
Genus Alphapapillomavirus
Species Human papillomavirus 6
Host Human, monkeys
Cell Tropism Epithelial cells of skin, mucous membranes
Associated Disease Malignant tumours
Mode of Transmission Sexual, indirect and direct contact, auto-inoculation
VIPR DB link N.A.
ICTV DB link https://talk.ictvonline.org/ictv-reports/ictv_9th_report/dsdna-viruses-2011/w/dsdna_viruses/121/papillomaviridae
Virus Host DB link http://www.genome.jp/virushostdb/view/?virus_lineage=Papillomaviridae

Publication Information

Paper Title Human TATA Binding Protein Inhibits Human Papillomavirus Type 11 DNA Replication by Antagonizing E1-E2 Protein Complex Formation on the Viral Origin of Replication
Author's Name Kelly A. Hartley and Kenneth A. Alexander
Journal Name Journal Of Virology
Pubmed ID 11967317
Abstract The human papillomavirus (HPV) protein E2 possesses dual roles in the viral life cycle. By interacting directly with host transcription factors in basal keratinocytes, E2 promotes viral transcription. As keratinocyte differentiation progresses, E2 associates with the viral helicase, E1, to activate vegetative viral DNA replication. How E2s major role switches from transcription to replication during keratinocyte differentiation is not understood, but the presence of a TATA site near the viral origin of replication led us to hypothesize that TATA-binding protein (TBP) could affect HPV replication. Here we show that the C-terminal domain of TBP (TBPc) is a potent inhibitor of E2-stimulated HPV DNA replication in vitro (50% inhibitory concentration = 0.56 nM). Increasing the E1 concentration could not overcome TBPc inhibition in replication assays, indicating that TBPc is a noncompetitive inhibitor of E1 binding. While direct E2-TBPc association could be demonstrated, this interaction could not fully account for the mechanism of TBPc-mediated inhibition of viral replication. Because E2 supports sequence-specific binding of E1 to the viral ori, we proposed that TBPc antagonizes E1-ori association indirectly through inhibition of E2-DNA binding. Indeed, TBPc potently antagonized E2 binding to DNA in the absence (K(i) = 0.5 +/- 0.1 nM) and presence (K(i) = 0.6 +/- 0.3 nM) of E1. Since E2 and TBPc cannot be coadjacent on viral sequences, direct DNA-binding competition between TBPc and E2 was responsible for replication inhibition. Given the ability of TBPc to inhibit HPV DNA replication in vitro and data indicating that TBPc antagonized E2-ori association, we propose that transcription factors regulate HPV DNA replication as well as viral transcription.
Used Model N.A.
DOI 10.1128/JVI.76.10.5014?5023.2002