| Gene Name | ANKS1B |
| HF Protein Name | Ankyrin repeat and sterile alpha motif domain-containing protein 1B |
| HF Function | Associated with virus infection, interact with NS3 of virus |
| Uniprot ID | Q7Z6G8 |
| Protein Sequence | View Fasta Sequence |
| NCBI Gene ID | 56899 |
| Host Factor (HF) Name in Paper | ANKS1B |
| Gene synonyms | N.A. |
| Ensemble Gene ID | ENSG00000185046 |
| Ensemble Transcript | ENST00000341752 [Q7Z6G8-9];ENST00000546568 [Q7Z6G8-2];ENST00000546960 [Q7Z6G8-4];ENST00000547010 [Q7Z6G8-6];ENST00000547446 [Q7Z6G8-10];ENST00000547776 [Q7Z6G8-1];ENST00000549025 [Q7Z6G8-8];ENST00000549493 [Q7Z6G8-3];ENST00000549558 [Q7Z6G8-7];ENST00000550693 [Q7Z6G8-5] |
| KEGG ID | Go to KEGG Database |
| Gene Ontology ID(s) | GO:0005829, GO:0005886, GO:0014069, GO:0015030, GO:0030054, GO:0043197, GO:0043231, GO:0045211, GO:0046875, GO:1900383, |
| MINT ID | Q7Z6G8 |
| STRING | Click to see interaction map |
| GWAS Analysis | Click to see gwas analysis |
| OMIM ID | 607815 |
| PANTHER ID | PTHR24174;PTHR24174:SF3 |
| PDB ID(s) | 2EAM, 2KE7, 2KIV, 2M38, |
| pfam ID | PF12796, PF00640, PF00536, |
| Drug Bank ID | N.A., |
| ChEMBL ID | N.A. |
| Organism | Homo sapiens (Human) |
| Virus Name | Dengue virus 2 |
| Virus Short Name | DENV 2 |
| Order | Unassigned |
| Virus Family | flaviviridae |
| Virus Subfamily | N.A. |
| Genus | Flavivirus |
| Species | Dengue virus |
| Host | Vertebrates |
| Cell Tropism | Phagocytes, hepatocytes |
| Associated Disease | Dengue fever |
| Mode of Transmission | Sexual contact, blood, breast feeding |
| VIPR DB link | http://www.viprbrc.org/brc/home.spg?decorator=flavi |
| ICTV DB link | https://talk.ictvonline.org/ictv-reports/ictv_online_report/positive-sense-rna-viruses/w/flaviviridae |
| Virus Host DB link | http://www.genome.jp/virushostdb/view/?virus_lineage=Flaviviridae |
| Paper Title | Comparative Flavivirus Host Protein Interaction Mapping Reveals Mechanisms of Dengueâ¨and Zika Virus Pathogenesis |
| Author's Name | Priya S. Shah, Nichole Link, Gwendolyn M. Jang, Phillip P. Sharp, Tongtong Zhu, â¨Danielle L. Swaney, Jeffrey R. Johnson, John Von Dollen, Holly R. Ramage, Laura Satkamp, â¨Billy Newton, Ruth Huttenhain, Marine J. Petit, Tierney Baum, Amanda Everitt, Orly Laufman, â¨Michel Tassetto, Michael Shales, Erica Stevenson, Gabriel N. Iglesias, Leila Shokat, Shashank Tripathi, Vinod Balasubramaniam, Laurence G. Webb, Sebastian Aguirre,8 A. Jeremy Willsey, Adolfo Garcia-Sastre, Katherine S. Pollard, Sara Cherry, Andrea V. Gamarnik, Ivan Marazzi, Jack Taunton, â¨Ana Fernandez-Sesma, Hugo J. Bellen, Raul Andino, and Nevan J. Krogan |
| Journal Name | Cell |
| Pubmed ID | 30550790 |
| Abstract | Mosquito-borne flaviviruses, including dengue virus (DENV) and Zika virus (ZIKV), are a growing public health concern. Systems-level analysis of how flaviviruses hijack cellular processes through virus-host protein-protein interactions (PPIs) provides information about their replication and pathogenic mechanisms. We used affinity purification-mass spectrometry (AP-MS) to compare flavivirus-hostinteractions for two viruses (DENV and ZIKV) in two hosts (human and mosquito). Conserved virus-host PPIs revealed that the flavivirusNS5 protein suppresses interferon stimulated genes by inhibiting recruitment of the transcription complex PAF1C and that chemical modulation of SEC61 inhibits DENV and ZIKV replication in human and mosquito cells. Finally, we identified a ZIKVspecific interactionbetween NS4A and ANKLE2, a gene linked to hereditary microcephaly, and showed that ZIKV NS4A causes microcephaly in Drosophila in an ANKLE2-dependent manner. Thus, comparative flavivirus-host PPI mapping provides biological insights and, when coupled with in vivo models, can be used to unravel pathogenic mechanisms. |
| Used Model | Hek293T, Huh7, HeLa S3, U2OS, A549, Vero, BHK and Aag2 |
| DOI | 10.1016/j.cell.2018.11.028 |
